BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037A02SP1|AL430321
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1462 1660 0.0
>3x_Contig1462
Length = 8247
Score = 1660 bits (828), Expect = 0.0
Identities = 848/864 (98%)
Strand = Plus / Minus
Query: 1 taacttgctttactggcttgtttctgttacggttcggtttcacccccttaccggaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6951 taacttgctttactggcttgtttctgttacggttcggtttcacccccttaccggaagaag 6892
Query: 61 gtcgttttgacattctgcaaacaaggaatgtyatcgctgactgttttacaccaatacgaa 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6891 gtcgttttgacattctgcaaacaaggaatgttatcgctgactgttttacaccaatacgaa 6832
Query: 121 acaactatcaatagttgtgaatcttcctttcgagatgagtaacggcatgaacctctgcyt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6831 acaactatcaatagttgtgaatcttcctttcgagatgagtaacggcatgaacctctgctt 6772
Query: 181 gtcagtgcaagcycatcgctctttcaatctctgacagaaattttcgaacttcgatatgac 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6771 gtcagtgcaagctcatcgctctttcaatctctgacagaaattttcgaacttcgatatgac 6712
Query: 241 aaggtatatgtyacccggatctgtaccacatgaccacaactcgtcatacaattatacgta 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6711 aaggtatatgttacccggatctgtaccacatgaccacaactcgtcatacaattatacgta 6652
Query: 301 ccatttgagatgggggttatcatcatcaaaagcactgtaagtgactcctttgaggcttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6651 ccatttgagatgggggttatcatcatcaaaagcactgtaagtgactcctttgaggcttga 6592
Query: 361 agttgattacttagcgtctgtttggataamagcagttaattttycctttatatctatyct 420
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct: 6591 agttgattacttagcgtctgtttggataaaagcagttaatttttcctttatatctattct 6532
Query: 421 caccgttcttactttaactctccattttmaacattcaaagattaactggaaacaactaag 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 6531 caccgttcttactttaactctccattttaaacattcaaagattaactggaaacaactaag 6472
Query: 481 atgattaacatgacttcatgacggaaaatatggattaamattatcgatagatagttacat 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6471 atgattaacatgacttcatgacggaaaatatggattaaaattatcgatagatagttacat 6412
Query: 541 aagaccttacaataagcaagtagataamagaagtagatattaagttgtgtgataataata 600
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6411 aagaccttacaataagcaagtagataaaagaagtagatattaagttgtgtgataataata 6352
Query: 601 cattttgamaatgatacagcagcataggagagamaagatcttaacgcaatatttctggma 660
|||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 6351 cattttgaaaatgatacagcagcataggagagaaaagatcttaacgcaatatttctggaa 6292
Query: 661 tatgactgacttggcaaatccaactgatagamtgtctcgtaccacgttctgcgtcgatta 720
||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 6291 tatgactgaattggcaaatccaactgatagaatgtttcgtaccacgttctgcgtcgatta 6232
Query: 721 cccttgcgtcttcaagcattcttaagacatcatccaagtggaaacctttttccaatcctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6231 cccttgcgtcttcaagcattcttaagacatcatccaagtggaaacctttttccaatcctc 6172
Query: 781 tttcaattgctttgcacaagactcttcttctgtgatacctcttgttcatggctggctctc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6171 tttcaattgctttgcacaagactcttcttctgtgatacctcttgttcatggctggctctc 6112
Query: 841 ttctccagctgacatgatacattt 864
||||||||||||||||||||||||
Sbjct: 6111 ttctccagctgacatgatacattt 6088
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5038
Number of Sequences: 1807
Number of extensions: 5038
Number of successful extensions: 23
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)